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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
137
total RNA-seq
91
single cell RNA-seq
14
ATAC-seq
Assay category
228
Transcription
14
DNA accessibility
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
167
bigWig
164
bam
164
tsv
91
fastq
19
zippedFastqFolder
Organism
242
Homo sapiens
Biosample type
135
tissue
107
primary cell
Organ
176
pancreas
52
epithelium
14
kidney
3
connective tissue
1
adipose tissue
Project
183
AMP
59
HPAP
Genome assembly (visualization)
179
GRCh38
165
hg19
Lab
169
AMP-T2D consortium
59
Klaus Kaestner, Upenn
14
Katalin Susztak, Upenn
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
242 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
tissue
islet of Langerhans
120
kidney
3
11
adipose tissue
1
primary cell
Langerhans cell
40
pancreatic alpha cell
15
7
2
pancreatic beta cell
1
9
1
pancreatic acinar cell
5
pancreatic delta cell
4
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