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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
13
ATAC-seq
12
WGBS
8
Hi-C
2
FAIRE-seq
Assay category
Transcription
27
DNA methylation
15
DNA accessibility
8
3D chromatin structure
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
27
bigWig
23
bed bedMethyl
23
bigBed bedMethyl
17
bam
7
bed narrowPeak
7
fastq
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
50
Homo sapiens
Biosample type
30
tissue
20
primary cell
Organ
15
epithelium
14
heart
9
pancreas
7
brain
7
vasculature
6
blood vessel
6
musculature of body
5
kidney
5
limb
3
liver
2
connective tissue
1
artery
1
eye
1
pericardium
Project
43
AMP
7
HPAP
Genome assembly (visualization)
26
hg19
21
GRCh38
Lab
43
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
50 results
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Clear Filters
RRBS
ATAC-seq
WGBS
Hi-C
FAIRE-seq
tissue
heart left ventricle
1
2
4
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
kidney
1
1
+ See 13 more…
primary cell
pancreatic alpha cell
5
pancreatic beta cell
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 10 more…
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