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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
18
small RNA-seq
12
WGBS
9
RRBS
6
ATAC-seq
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
60
Transcription
21
DNA methylation
8
DNA accessibility
Target of assay
3
control
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
310
August, 2021
275
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
89
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
49
March, 2020
47
September, 2023
44
November, 2019
40
September, 2020
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
4
December, 2019
4
March, 2019
4
March, 2023
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
77
bam
76
bigWig
60
tsv
17
bed bedMethyl
17
bigBed bedMethyl
7
bed narrowPeak
2
bigBed narrowPeak
Organism
89
Homo sapiens
Biosample type
73
tissue
16
primary cell
Organ
25
heart
17
connective tissue
15
brain
12
adipose tissue
epithelium
11
kidney
10
vasculature
9
blood vessel
9
liver
6
musculature of body
6
pancreas
3
artery
2
pericardium
1
eye
1
limb
Project
89
AMP
Genome assembly (visualization)
76
hg19
74
GRCh38
Lab
89
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
Hi-C
organ_slims!
epithelium
BIOSAMPLE
ASSAY
89 results
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total RNA-seq
small RNA-seq
WGBS
RRBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
1
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 25 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 8 more…
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