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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
31
total RNA-seq
16
small RNA-seq
12
WGBS
6
ATAC-seq
RRBS
4
Hi-C
2
FAIRE-seq
Assay category
74
DNA binding
47
Transcription
12
DNA methylation
8
DNA accessibility
4
3D chromatin structure
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
545
February, 2021
279
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
74
October, 2018
71
July, 2019
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
138
bam
108
bigWig
58
fastq
52
bed narrowPeak
47
bigBed narrowPeak
47
tsv
8
bed bedMethyl
8
bigBed bedMethyl
Organism
145
Homo sapiens
Biosample type
145
tissue
24
primary cell
Organ
55
pancreas
33
adipose tissue
33
connective tissue
19
heart
10
brain
8
liver
7
blood vessel
7
musculature of body
7
vasculature
5
limb
3
kidney
1
artery
Project
145
AMP
Genome assembly (visualization)
106
GRCh38
99
hg19
Lab
145
AMP-T2D consortium
Audit category:
1
inconsistent control read length
assay_title!
RRBS
BIOSAMPLE
ASSAY
145 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
Hi-C
FAIRE-seq
tissue
body of pancreas
33
2
2
subcutaneous adipose tissue
12
4
1
endocrine pancreas
16
omental fat pad
11
4
1
heart left ventricle
2
4
2
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