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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
single cell RNA-seq
2
FAIRE-seq
Assay category
62
Transcription
12
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Date released
697
February, 2021
406
November, 2017
405
August, 2017
399
May, 2021
341
May, 2020
314
October, 2019
218
June, 2019
213
August, 2021
204
February, 2023
166
May, 2022
120
July, 2018
May, 2019
94
December, 2017
90
July, 2019
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
September, 2020
16
January, 2021
16
November, 2020
12
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
December, 2019
6
April, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
Available data
82
bigWig
79
bam
62
tsv
8
bed bedMethyl
8
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
90
Homo sapiens
Biosample type
71
tissue
19
primary cell
Organ
23
heart
17
connective tissue
13
brain
12
adipose tissue
11
blood vessel
11
vasculature
9
liver
9
musculature of body
7
epithelium
7
kidney
5
limb
4
pancreas
3
artery
1
pericardium
Project
90
AMP
Genome assembly (visualization)
76
GRCh38
73
hg19
Lab
90
AMP-T2D consortium
assay_title!
RRBS
single cell RNA-seq
month_released!
May, 2019
BIOSAMPLE
ASSAY
90 results
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total RNA-seq
small RNA-seq
WGBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
2
4
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 22 more…
primary cell
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 12 more…
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