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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
15
small RNA-seq
RRBS
12
WGBS
7
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
49
Transcription
12
DNA methylation
8
DNA accessibility
7
3D chromatin structure
Target of assay
3
control
Date released
406
November, 2017
397
May, 2021
341
May, 2020
314
August, 2021
310
October, 2019
280
August, 2017
260
February, 2021
200
June, 2019
200
May, 2022
191
February, 2023
166
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
76
July, 2019
73
September, 2018
62
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
68
bigWig
66
bam
49
tsv
8
bed bedMethyl
8
bigBed bedMethyl
7
bed narrowPeak
3
bed bed3+
3
hdf5
2
bigBed narrowPeak
Organism
76
Homo sapiens
Biosample type
61
tissue
15
primary cell
Organ
23
heart
connective tissue
16
brain
12
adipose tissue
11
blood vessel
11
vasculature
9
liver
9
musculature of body
7
epithelium
7
kidney
5
limb
4
pancreas
3
artery
1
pericardium
Project
76
AMP
Genome assembly (visualization)
63
GRCh38
59
hg19
Lab
76
AMP-T2D consortium
assay_title!
RRBS
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
76 results
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total RNA-seq
small RNA-seq
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
2
right lobe of liver
2
2
1
body of pancreas
2
2
gastrocnemius medialis
4
heart
2
1
1
+ See 20 more…
primary cell
cerebellar granule cell
2
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
+ See 8 more…
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