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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
18
small RNA-seq
12
WGBS
RRBS
6
ATAC-seq
6
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
60
Transcription
12
DNA methylation
8
DNA accessibility
6
3D chromatin structure
Target of assay
3
control
Date released
683
February, 2021
400
November, 2017
376
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
88
November, 2018
86
July, 2019
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
78
bigWig
77
bam
60
tsv
8
bed bedMethyl
8
bigBed bedMethyl
7
bed narrowPeak
2
bed bed3+
2
bigBed narrowPeak
2
hdf5
Organism
86
Homo sapiens
Biosample type
71
tissue
15
primary cell
Organ
23
heart
17
connective tissue
16
brain
12
adipose tissue
11
blood vessel
11
vasculature
9
liver
9
musculature of body
epithelium
7
kidney
5
limb
4
pancreas
3
artery
1
pericardium
Project
86
AMP
Genome assembly (visualization)
74
GRCh38
69
hg19
Lab
86
AMP-T2D consortium
assay_title!
RRBS
organ_slims!
epithelium
BIOSAMPLE
ASSAY
86 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 22 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 7 more…
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