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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
total RNA-seq
15
small RNA-seq
RRBS
11
WGBS
7
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
58
Transcription
11
DNA methylation
8
DNA accessibility
7
3D chromatin structure
Target of assay
3
control
Date released
712
February, 2021
399
May, 2021
352
August, 2017
307
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
91
November, 2017
84
July, 2019
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
77
bigWig
75
bam
58
tsv
8
bed bedMethyl
8
bigBed bedMethyl
7
bed narrowPeak
3
bed bed3+
3
hdf5
2
bigBed narrowPeak
Organism
84
Homo sapiens
Biosample type
63
tissue
21
primary cell
Organ
23
heart
17
connective tissue
16
brain
12
adipose tissue
11
blood vessel
11
vasculature
liver
9
musculature of body
7
epithelium
7
kidney
5
limb
4
pancreas
3
artery
1
pericardium
Project
84
AMP
Genome assembly (visualization)
72
GRCh38
68
hg19
Lab
84
AMP-T2D consortium
assay_title!
RRBS
organ_slims!
liver
BIOSAMPLE
ASSAY
84 results
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total RNA-seq
small RNA-seq
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
gastrocnemius medialis
4
+ See 20 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 13 more…
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