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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
total RNA-seq
RRBS
13
small RNA-seq
11
WGBS
6
ATAC-seq
4
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
49
Transcription
11
DNA methylation
8
DNA accessibility
4
3D chromatin structure
Target of assay
3
control
Date released
406
November, 2017
399
May, 2021
341
May, 2020
329
February, 2021
326
August, 2017
318
August, 2021
313
October, 2019
204
February, 2023
198
May, 2022
174
June, 2019
168
July, 2018
113
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
73
September, 2018
72
July, 2019
60
November, 2019
59
September, 2020
58
March, 2020
53
October, 2018
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
22
October, 2017
21
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
14
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
6
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
68
bigWig
65
bam
49
tsv
7
bed bedMethyl
7
bed narrowPeak
7
bigBed bedMethyl
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
72
Homo sapiens
Biosample type
54
tissue
18
primary cell
Organ
23
heart
17
connective tissue
16
brain
adipose tissue
11
blood vessel
11
vasculature
9
liver
musculature of body
7
epithelium
7
kidney
5
limb
4
pancreas
3
artery
1
pericardium
Project
72
AMP
Genome assembly (visualization)
62
GRCh38
60
hg19
Lab
72
AMP-T2D consortium
assay_title!
RRBS
organ_slims!
adipose tissue
musculature of body
BIOSAMPLE
ASSAY
72 results
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Clear Filters
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
2
right lobe of liver
2
2
1
body of pancreas
2
2
heart
2
1
1
frontal cortex
1
1
1
+ See 17 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 12 more…
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