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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
15
small RNA-seq
RRBS
10
WGBS
5
Hi-C
4
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
44
Transcription
10
DNA methylation
6
DNA accessibility
5
3D chromatin structure
Target of assay
3
control
Date released
403
November, 2017
397
May, 2021
341
May, 2020
308
August, 2021
280
August, 2017
263
October, 2019
200
May, 2022
195
June, 2019
194
February, 2021
166
July, 2018
156
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
73
September, 2018
70
May, 2019
65
July, 2019
60
November, 2019
59
September, 2020
58
March, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
22
October, 2017
20
February, 2020
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
58
bigWig
57
bam
44
tsv
7
bed bedMethyl
7
bigBed bedMethyl
5
bed narrowPeak
2
bigBed narrowPeak
1
bed bed3+
1
hdf5
Organism
65
Homo sapiens
Biosample type
54
tissue
11
primary cell
Organ
23
heart
connective tissue
16
brain
12
adipose tissue
blood vessel
11
vasculature
9
liver
9
musculature of body
7
epithelium
7
kidney
5
limb
4
pancreas
3
artery
1
pericardium
Project
65
AMP
Genome assembly (visualization)
55
GRCh38
50
hg19
Lab
65
AMP-T2D consortium
assay_title!
RRBS
organ_slims!
connective tissue
blood vessel
BIOSAMPLE
ASSAY
65 results
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total RNA-seq
small RNA-seq
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
2
right lobe of liver
2
2
1
body of pancreas
2
2
gastrocnemius medialis
4
heart
2
1
1
+ See 16 more…
primary cell
cerebellar granule cell
2
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
epithelial cell of proximal tubule
1
+ See 4 more…
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