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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
Hi-C
4
small RNA-seq
4
total RNA-seq
3
single cell RNA-seq
RRBS
1
ATAC-seq
1
FAIRE-seq
1
WGBS
Assay category
11
Transcription
7
3D chromatin structure
2
DNA accessibility
1
DNA methylation
Target of assay
3
control
Date released
155
October, 2019
91
November, 2017
62
June, 2019
35
May, 2019
21
July, 2019
16
October, 2017
15
February, 2020
6
February, 2021
2
March, 2020
2
November, 2018
1
February, 2023
Available data
17
bigWig
14
bam
11
tsv
3
bed bed3+
3
hdf5
1
bed bedMethyl
1
bed narrowPeak
1
bigBed bedMethyl
1
bigBed narrowPeak
Organism
21
Homo sapiens
Biosample type
15
tissue
6
primary cell
Organ
23
heart
17
connective tissue
16
brain
12
adipose tissue
11
blood vessel
11
vasculature
9
liver
9
musculature of body
7
epithelium
7
kidney
5
limb
4
pancreas
3
artery
1
pericardium
Project
21
AMP
Genome assembly (visualization)
15
hg19
13
GRCh38
Lab
21
AMP-T2D consortium
assay_title!
RRBS
BIOSAMPLE
ASSAY
21 results
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Hi-C
small RNA-seq
total RNA-seq
single cell RNA-seq
ATAC-seq
FAIRE-seq
WGBS
tissue
gastrocnemius medialis
4
frontal cortex
1
1
1
diencephalon
1
1
temporal lobe
1
1
cerebellum
1
+ See 3 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
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