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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
18
small RNA-seq
15
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
3
single cell RNA-seq
Assay category
27
DNA methylation
21
Transcription
8
3D chromatin structure
6
DNA accessibility
Target of assay
3
control
Date released
280
August, 2017
245
August, 2021
217
May, 2021
214
October, 2019
174
May, 2022
170
February, 2021
151
May, 2020
112
February, 2023
94
November, 2017
62
July, 2019
49
March, 2020
48
July, 2018
47
September, 2023
44
December, 2017
43
April, 2018
43
September, 2020
41
November, 2019
33
September, 2018
29
October, 2018
24
February, 2018
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
November, 2018
14
May, 2023
11
November, 2020
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
January, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
41
bigWig
38
bam
23
bed bedMethyl
23
bigBed bedMethyl
21
tsv
7
bed narrowPeak
4
bed bed3+
4
hdf5
bigBed narrowPeak
Organism
62
Homo sapiens
Biosample type
44
tissue
18
primary cell
Organ
15
heart
13
brain
8
epithelium
8
musculature of body
7
vasculature
6
blood vessel
6
liver
5
connective tissue
5
kidney
5
limb
4
pancreas
3
adipose tissue
1
artery
1
eye
1
pericardium
Project
62
AMP
Genome assembly (visualization)
45
hg19
35
GRCh38
Lab
62
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
total RNA-seq
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
62 results
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Clear Filters
small RNA-seq
RRBS
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
1
4
2
gastrocnemius medialis
4
right lobe of liver
2
1
aorta
2
body of pancreas
2
+ See 24 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 12 more…
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