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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
18
small RNA-seq
14
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
26
DNA methylation
21
Transcription
8
3D chromatin structure
8
DNA accessibility
Target of assay
3
control
Date released
406
November, 2017
322
August, 2017
277
October, 2019
245
August, 2021
217
May, 2021
211
June, 2019
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
94
December, 2017
88
November, 2018
85
February, 2023
80
April, 2019
74
October, 2018
63
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
41
bigWig
38
bam
22
bed bedMethyl
22
bigBed bedMethyl
21
tsv
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
63
Homo sapiens
Biosample type
46
tissue
17
primary cell
Organ
15
heart
14
brain
8
epithelium
8
musculature of body
7
vasculature
6
blood vessel
6
kidney
6
liver
5
connective tissue
5
limb
4
pancreas
3
adipose tissue
1
artery
eye
1
pericardium
Project
63
AMP
Genome assembly (visualization)
46
hg19
35
GRCh38
Lab
63
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
total RNA-seq
organ_slims!
eye
BIOSAMPLE
ASSAY
63 results
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Clear Filters
small RNA-seq
RRBS
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
1
4
2
gastrocnemius medialis
4
right lobe of liver
2
1
aorta
2
body of pancreas
2
+ See 24 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 11 more…
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