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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
small RNA-seq
total RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
1
ATAC-seq
1
FAIRE-seq
Assay category
7
Transcription
3
3D chromatin structure
2
DNA accessibility
2
DNA methylation
Target of assay
3
control
Date released
91
November, 2017
85
October, 2019
30
June, 2019
28
May, 2019
16
October, 2017
14
July, 2019
2
March, 2020
2
November, 2018
1
February, 2023
Available data
12
bigWig
9
bam
7
tsv
3
bed bed3+
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed narrowPeak
1
bigBed narrowPeak
Organism
14
Homo sapiens
Biosample type
7
primary cell
7
tissue
Organ
15
heart
14
brain
8
epithelium
8
musculature of body
7
vasculature
6
blood vessel
6
kidney
6
liver
5
connective tissue
5
limb
4
pancreas
3
adipose tissue
1
artery
1
eye
1
pericardium
Project
14
AMP
Genome assembly (visualization)
13
hg19
8
GRCh38
Lab
14
AMP-T2D consortium
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
14 results
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small RNA-seq
Hi-C
single cell RNA-seq
RRBS
ATAC-seq
FAIRE-seq
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 1 more…
tissue
frontal cortex
1
1
brain
1
cerebellum (Hemisphere)
1
diencephalon
1
posterior cingulate cortex
1
+ See 1 more…
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