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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
11
Hi-C
4
WGBS
2
FAIRE-seq
1
MPRA
Assay category
19
DNA methylation
11
3D chromatin structure
2
DNA accessibility
Date released
214
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
15
bed bedMethyl
15
bigBed bedMethyl
6
bigWig
4
bed bed3+
4
hdf5
3
bam
3
bedpe bed3+
3
cool
3
hic
2
bed narrowPeak
2
bigBed narrowPeak
1
txt
Organism
32
Homo sapiens
Biosample type
16
primary cell
16
tissue
1
cell line
Organ
11
epithelium
6
brain
5
kidney
5
musculature of body
5
pancreas
4
heart
4
limb
4
vasculature
3
blood vessel
3
liver
2
connective tissue
1
eye
1
pericardium
Project
30
AMP
3
HPAP
Genome assembly (visualization)
94
hg19
GRCh38
Lab
30
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
2
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
33 results
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Clear Filters
RRBS
Hi-C
WGBS
FAIRE-seq
MPRA
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 11 more…
tissue
gastrocnemius medialis
4
heart left ventricle
1
2
kidney
1
1
aorta
1
brain
1
+ See 5 more…
cell line
MIN6
1
See all biosamples
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