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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
12
WGBS
4
ATAC-seq
4
Hi-C
Assay category
56
Transcription
12
DNA methylation
4
3D chromatin structure
4
DNA accessibility
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
41
fastq
19
zippedFastqFolder
12
bigWig
10
bam
8
bed bedMethyl
8
bigBed bedMethyl
Organism
76
Homo sapiens
Biosample type
59
primary cell
17
tissue
Organ
19
epithelium
19
pancreas
8
heart
5
limb
5
musculature of body
2
blood vessel
2
vasculature
1
brain
1
liver
Project
59
HPAP
17
AMP
Genome assembly (visualization)
hg19
82
GRCh38
Lab
59
Klaus Kaestner, Upenn
17
AMP-T2D consortium
assembly!
hg19
BIOSAMPLE
ASSAY
76 results
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single cell RNA-seq
total RNA-seq
WGBS
ATAC-seq
Hi-C
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
tissue
gastrocnemius medialis
4
heart left ventricle
4
aorta
2
heart right ventricle
2
heart
1
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