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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
total RNA-seq
15
small RNA-seq
12
WGBS
6
ATAC-seq
5
RRBS
4
Hi-C
1
FAIRE-seq
Assay category
45
Transcription
17
DNA methylation
7
DNA accessibility
4
3D chromatin structure
Date released
537
February, 2021
284
August, 2017
238
October, 2019
193
May, 2020
120
July, 2018
115
May, 2019
101
August, 2021
95
February, 2023
95
June, 2019
82
November, 2017
74
October, 2018
73
July, 2019
66
May, 2022
57
April, 2019
48
December, 2017
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
2
January, 2018
1
August, 2022
1
May, 2023
Available data
61
bam
60
bigWig
45
tsv
13
bed bedMethyl
13
bigBed bedMethyl
6
bed narrowPeak
1
bigBed narrowPeak
Organism
73
Homo sapiens
Biosample type
73
tissue
24
primary cell
Organ
20
heart
11
brain
10
adipose tissue
10
connective tissue
8
liver
7
blood vessel
7
musculature of body
7
vasculature
6
pancreas
5
limb
kidney
1
artery
1
pericardium
Project
73
AMP
Genome assembly (visualization)
59
GRCh38
56
hg19
Lab
73
AMP-T2D consortium
organ_slims!
kidney
BIOSAMPLE
ASSAY
73 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
RRBS
Hi-C
FAIRE-seq
tissue
heart left ventricle
2
4
2
1
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
gastrocnemius medialis
4
heart
2
1
1
frontal cortex
1
1
1
liver
2
1
right atrium auricular region
2
1
thoracic aorta
2
1
aorta
2
diencephalon
1
1
heart right ventricle
2
occipital lobe
1
1
parietal lobe
1
1
skeletal muscle tissue
1
1
temporal lobe
1
1
ascending aorta
1
brain
1
cerebellum
1
cerebellum (Hemisphere)
1
coronary artery
1
islet of Langerhans
1
muscle of leg
1
pancreas
1
pericardium
1
posterior cingulate cortex
1
right cardiac atrium
1
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