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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
8
Hi-C
3
single cell RNA-seq
1
ATAC-seq
Assay category
65
Transcription
DNA methylation
8
3D chromatin structure
1
DNA accessibility
Target of assay
3
control
Date released
686
February, 2021
314
May, 2020
265
May, 2021
254
August, 2017
213
August, 2021
168
July, 2018
140
February, 2023
125
October, 2019
121
May, 2022
93
November, 2017
74
July, 2019
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
8
November, 2018
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
77
bigWig
73
bam
65
tsv
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
74
Homo sapiens
Biosample type
52
tissue
22
primary cell
Organ
17
connective tissue
15
brain
12
adipose tissue
11
heart
8
liver
8
musculature of body
7
blood vessel
7
epithelium
7
vasculature
6
kidney
4
limb
4
pancreas
2
artery
1
pericardium
Project
74
AMP
Genome assembly (visualization)
69
hg19
66
GRCh38
Lab
74
AMP-T2D consortium
files.file_type!
bed narrowPeak
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
74 results
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Clear Filters
total RNA-seq
small RNA-seq
Hi-C
single cell RNA-seq
ATAC-seq
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
gastrocnemius medialis
4
right lobe of liver
2
2
+ See 16 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 14 more…
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