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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
RRBS
12
WGBS
8
Hi-C
3
single cell RNA-seq
1
ATAC-seq
Assay category
65
Transcription
12
DNA methylation
8
3D chromatin structure
1
DNA accessibility
Target of assay
3
control
Date released
692
February, 2021
314
May, 2020
266
May, 2021
263
August, 2017
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
125
October, 2019
93
November, 2017
86
July, 2019
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
85
bigWig
82
bam
65
tsv
8
bed bedMethyl
8
bigBed bedMethyl
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
86
Homo sapiens
Biosample type
64
tissue
22
primary cell
Organ
19
heart
17
connective tissue
15
brain
12
adipose tissue
9
blood vessel
9
liver
9
musculature of body
9
vasculature
7
epithelium
6
kidney
5
limb
4
pancreas
2
artery
1
pericardium
Project
86
AMP
Genome assembly (visualization)
74
GRCh38
69
hg19
Lab
86
AMP-T2D consortium
files.file_type!
bed narrowPeak
assay_title!
RRBS
BIOSAMPLE
ASSAY
86 results
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total RNA-seq
small RNA-seq
WGBS
Hi-C
single cell RNA-seq
ATAC-seq
tissue
heart left ventricle
2
4
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 20 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 14 more…
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