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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
9
RRBS
4
Hi-C
4
single cell RNA-seq
2
small RNA-seq
Assay category
45
Transcription
9
DNA methylation
4
3D chromatin structure
Target of assay
3
control
Date released
226
May, 2021
155
February, 2021
148
May, 2020
134
May, 2022
108
February, 2023
69
November, 2017
59
September, 2020
51
August, 2017
48
August, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
27
September, 2018
23
February, 2018
23
March, 2020
10
December, 2017
10
November, 2020
8
January, 2019
8
January, 2021
8
June, 2019
7
August, 2020
7
December, 2019
6
January, 2018
6
November, 2018
5
March, 2023
4
August, 2018
4
November, 2019
4
October, 2022
3
June, 2018
2
October, 2018
1
December, 2018
1
May, 2019
Available data
94
bigWig
90
bam
73
fastq
bed narrowPeak
44
tsv
14
bigBed narrowPeak
9
bed bedMethyl
9
bigBed bedMethyl
4
bed bed3+
4
hdf5
1
csv
Organism
58
Homo sapiens
Biosample type
tissue
58
primary cell
Organ
39
epithelium
26
pancreas
8
connective tissue
7
brain
7
kidney
5
heart
5
vasculature
4
blood vessel
3
musculature of body
2
adipose tissue
2
artery
2
liver
1
eye
1
pericardium
Project
58
AMP
Genome assembly (visualization)
57
hg19
44
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bed narrowPeak
biosample_type!
tissue
BIOSAMPLE
ASSAY
58 results
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total RNA-seq
RRBS
Hi-C
single cell RNA-seq
small RNA-seq
primary cell
pancreatic alpha cell
10
pancreatic beta cell
10
pancreatic ductal cell
4
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
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