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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
7
ChIP-seq
4
Hi-C
4
WGBS
1
single cell RNA-seq
Assay category
19
DNA methylation
7
DNA binding
4
3D chromatin structure
1
Transcription
Target of assay
6
control
1
recombinant protein
1
transcription factor
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
169
bam
bigWig
88
fastq
80
bed narrowPeak
75
bigBed narrowPeak
65
tsv
30
bed bedMethyl
30
bigBed bedMethyl
13
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
4
hdf5
1
csv
Organism
31
Homo sapiens
Biosample type
17
tissue
10
primary cell
4
cell line
Organ
6
epithelium
5
musculature of body
4
heart
4
kidney
4
limb
3
blood
3
bodily fluid
3
liver
3
spleen
2
brain
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
pericardium
Project
31
AMP
Genome assembly (visualization)
15
hg19
Lab
31
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bigWig
BIOSAMPLE
ASSAY
31 results
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Clear Filters
RRBS
ChIP-seq
Hi-C
WGBS
single cell RNA-seq
tissue
gastrocnemius medialis
4
heart left ventricle
1
2
spleen
3
aorta
1
brain
1
+ See 5 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
GM12878
3
HepG2
1
See all biosamples
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