Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
13
total RNA-seq
3
small RNA-seq
1
Hi-C
1
RRBS
Assay category
27
DNA binding
16
Transcription
1
3D chromatin structure
1
DNA methylation
Target of assay
25
transcription factor
2
RNA binding protein
2
chromatin remodeller
Date released
455
February, 2021
125
August, 2017
27
December, 2018
23
October, 2018
18
January, 2019
18
July, 2019
18
June, 2019
16
November, 2018
14
February, 2023
8
January, 2021
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
January, 2018
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
May, 2023
1
November, 2019
1
October, 2017
Available data
44
bigWig
43
bam
27
bed narrowPeak
27
bigBed narrowPeak
27
fastq
16
tsv
1
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
Organism
45
Homo sapiens
Biosample type
27
cell line
10
tissue
8
primary cell
Organ
27
blood
27
bodily fluid
25
heart
18
brain
18
connective tissue
13
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
11
liver
10
musculature of body
7
spleen
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
45
AMP
Genome assembly (visualization)
45
hg19
43
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
1
inconsistent control
1
inconsistent ontology term
BIOSAMPLE
ASSAY
45 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
Hi-C
RRBS
cell line
GM12878
27
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
primary cell
mesenchymal stem cell of adipose
1
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
+ See 2 more…
See all biosamples
Download