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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
single cell RNA-seq
10
total RNA-seq
6
RRBS
2
Hi-C
1
RNA microarray
Assay category
43
Transcription
6
DNA methylation
2
3D chromatin structure
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
45
bigWig
44
tsv
43
bam
33
fastq
6
bed bedMethyl
6
bigBed bedMethyl
2
bed bed3+
2
hdf5
Organism
52
Homo sapiens
Biosample type
51
primary cell
1
tissue
Organ
163
pancreas
52
epithelium
25
heart
20
connective tissue
18
brain
15
liver
14
kidney
12
adipose tissue
12
vasculature
11
blood vessel
10
musculature of body
5
limb
3
artery
2
pericardium
1
eye
Project
52
AMP
Genome assembly (visualization)
51
hg19
43
GRCh38
Lab
52
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
BIOSAMPLE
ASSAY
52 results
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single cell RNA-seq
total RNA-seq
RRBS
Hi-C
RNA microarray
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
hepatocyte
5
1
pancreatic acinar cell
5
pancreatic delta cell
4
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tissue
renal glomerulus
1
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