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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
Hi-C
4
total RNA-seq
2
small RNA-seq
1
RRBS
1
WGBS
1
pCHi-C
Assay category
6
3D chromatin structure
6
Transcription
2
DNA methylation
Date released
43
June, 2019
26
August, 2017
10
July, 2019
7
May, 2019
5
March, 2020
2
February, 2020
2
May, 2022
1
January, 2018
Available data
7
bam
7
bigWig
7
tsv
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hic
Organism
15
Homo sapiens
Biosample type
12
tissue
3
primary cell
Organ
32
heart
20
brain
20
connective tissue
20
pancreas
19
epithelium
16
vasculature
15
blood vessel
15
musculature of body
13
adipose tissue
13
kidney
13
liver
5
limb
3
artery
2
intestine
2
pericardium
1
adrenal gland
esophagus
1
eye
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
15
AMP
Genome assembly (visualization)
9
hg19
7
GRCh38
Lab
15
AMP-T2D consortium
organ_slims!
esophagus
BIOSAMPLE
ASSAY
15 results
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Hi-C
total RNA-seq
small RNA-seq
RRBS
WGBS
pCHi-C
tissue
psoas muscle
2
2
1
gastrocnemius medialis
4
skeletal muscle tissue
1
1
muscle of leg
1
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
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