Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
small RNA-seq
4
total RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
2
pCHi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
11
Transcription
3
3D chromatin structure
2
DNA accessibility
2
DNA methylation
Target of assay
3
control
Date released
91
November, 2017
86
October, 2019
30
June, 2019
28
May, 2019
18
July, 2019
16
October, 2017
12
February, 2020
2
March, 2020
2
November, 2018
1
February, 2023
Available data
16
bigWig
13
bam
13
tsv
3
bed bed3+
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed narrowPeak
1
bigBed narrowPeak
Organism
20
Homo sapiens
Biosample type
13
tissue
7
primary cell
Organ
32
heart
20
brain
20
connective tissue
20
pancreas
19
epithelium
16
vasculature
15
blood vessel
15
musculature of body
13
adipose tissue
13
kidney
13
liver
5
limb
3
artery
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
eye
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
20
AMP
Genome assembly (visualization)
17
hg19
12
GRCh38
Lab
20
AMP-T2D consortium
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
small RNA-seq
total RNA-seq
Hi-C
single cell RNA-seq
RRBS
pCHi-C
ATAC-seq
FAIRE-seq
tissue
frontal cortex
1
1
1
diencephalon
1
1
temporal lobe
1
1
Ammon's horn
1
brain
1
+ See 4 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 1 more…
See all biosamples
Download