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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
total RNA-seq
17
ATAC-seq
16
small RNA-seq
12
WGBS
6
RRBS
4
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
51
Transcription
19
DNA accessibility
18
DNA methylation
4
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
64
bam
63
bigWig
47
tsv
14
bed bedMethyl
14
bigBed bedMethyl
7
bed narrowPeak
2
bigBed narrowPeak
Organism
92
Homo sapiens
Biosample type
92
tissue
31
primary cell
Organ
20
heart
18
kidney
11
adipose tissue
11
brain
11
connective tissue
8
liver
7
blood vessel
7
musculature of body
7
vasculature
6
pancreas
5
limb
1
artery
1
pericardium
Project
92
AMP
Genome assembly (visualization)
73
GRCh38
61
hg19
Lab
78
AMP-T2D consortium
14
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
92 results
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Clear Filters
total RNA-seq
ATAC-seq
small RNA-seq
WGBS
RRBS
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
kidney
11
1
3
1
heart left ventricle
2
2
4
1
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
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