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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
11
ATAC-seq
4
Hi-C
4
WGBS
3
single cell RNA-seq
1
total RNA-seq
Assay category
19
DNA methylation
11
DNA accessibility
4
3D chromatin structure
4
Transcription
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
bigWig
82
bam
65
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
38
Homo sapiens
Biosample type
29
tissue
9
primary cell
Organ
18
kidney
6
epithelium
5
musculature of body
4
heart
4
limb
2
brain
2
connective tissue
2
liver
2
pancreas
2
vasculature
1
adipose tissue
1
blood vessel
1
eye
1
pericardium
Project
38
AMP
Genome assembly (visualization)
16
hg19
12
GRCh38
Lab
24
AMP-T2D consortium
14
Katalin Susztak, Upenn
Audit category:
2
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
38 results
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Clear Filters
RRBS
ATAC-seq
Hi-C
WGBS
single cell RNA-seq
total RNA-seq
tissue
kidney
1
11
3
gastrocnemius medialis
4
heart left ventricle
1
2
adipose tissue
1
aorta
1
+ See 5 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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