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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
RRBS
6
total RNA-seq
3
ChIP-seq
3
Hi-C
1
ATAC-seq
Assay category
6
DNA methylation
6
Transcription
3
3D chromatin structure
3
DNA binding
1
DNA accessibility
Target of assay
10
histone
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
80
May, 2022
52
February, 2023
40
September, 2018
33
April, 2018
33
July, 2018
32
February, 2021
24
May, 2021
19
September, 2020
18
June, 2019
15
August, 2017
14
October, 2019
13
July, 2019
7
August, 2020
6
December, 2019
6
November, 2019
6
November, 2020
5
December, 2017
5
March, 2020
5
September, 2017
4
November, 2017
3
August, 2018
3
August, 2021
3
October, 2022
2
May, 2019
2
October, 2018
1
June, 2018
Available data
10
bam
9
bigWig
6
bed bedMethyl
6
bigBed bedMethyl
6
tsv
2
bed bed3+
2
bed narrowPeak
2
hdf5
1
bedpe bed3+
1
hic
Organism
19
Homo sapiens
Biosample type
13
primary cell
6
cell line
Organ
51
pancreas
25
heart
19
connective tissue
19
epithelium
18
brain
13
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
5
limb
3
artery
2
pericardium
1
eye
Project
19
AMP
Genome assembly (visualization)
17
hg19
8
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
19 results
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Clear Filters
RRBS
total RNA-seq
ChIP-seq
Hi-C
ATAC-seq
primary cell
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
+ See 5 more…
cell line
EndoC_BH1
1
3
1
1
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