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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
total RNA-seq
18
small RNA-seq
9
WGBS
7
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
1
DNase-seq
Assay category
69
Transcription
10
DNA accessibility
9
DNA methylation
Target of assay
3
control
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
90
bigWig
88
bam
69
tsv
23
bed bedMethyl
23
bigBed bedMethyl
9
bed narrowPeak
5
bed bed3+
4
hdf5
3
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
88
Homo sapiens
Biosample type
64
tissue
24
primary cell
Organ
22
connective tissue
21
heart
13
brain
12
adipose tissue
9
blood vessel
9
vasculature
7
kidney
7
liver
5
epithelium
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
88
AMP
Genome assembly (visualization)
85
GRCh38
78
hg19
Lab
88
AMP-T2D consortium
BIOSAMPLE
ASSAY
88 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
DNase-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
1
+ See 21 more…
primary cell
osteoblast
4
1
1
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
+ See 11 more…
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