Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
15
small RNA-seq
14
RRBS
WGBS
7
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
49
Transcription
14
DNA methylation
8
DNA accessibility
7
3D chromatin structure
Target of assay
3
control
Date released
November, 2017
397
May, 2021
341
May, 2020
314
August, 2021
310
October, 2019
283
August, 2017
254
February, 2021
200
June, 2019
191
February, 2023
166
July, 2018
159
May, 2022
120
May, 2019
94
December, 2017
80
April, 2019
80
November, 2018
78
July, 2019
73
September, 2018
62
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
60
bigWig
57
bam
49
tsv
14
bed bedMethyl
14
bigBed bedMethyl
7
bed narrowPeak
3
bed bed3+
3
hdf5
2
bigBed narrowPeak
Organism
78
Homo sapiens
Biosample type
55
tissue
23
primary cell
Organ
18
brain
connective tissue
17
heart
13
epithelium
12
adipose tissue
11
kidney
10
vasculature
9
blood vessel
9
liver
9
musculature of body
6
pancreas
4
limb
3
artery
2
pericardium
1
eye
Project
78
AMP
Genome assembly (visualization)
73
hg19
55
GRCh38
Lab
78
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
month_released!
November, 2017
assay_title!
WGBS
BIOSAMPLE
ASSAY
78 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
small RNA-seq
RRBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
1
2
body of pancreas
2
2
gastrocnemius medialis
4
right lobe of liver
2
2
frontal cortex
1
1
1
+ See 20 more…
primary cell
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
skeletal muscle satellite cell
1
1
+ See 13 more…
See all biosamples
Download