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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
RRBS
8
Hi-C
4
WGBS
2
ATAC-seq
2
FAIRE-seq
Assay category
17
DNA methylation
8
3D chromatin structure
4
DNA accessibility
Date released
406
November, 2017
322
August, 2017
292
October, 2019
226
May, 2021
200
May, 2022
196
August, 2021
183
June, 2019
153
February, 2023
152
May, 2020
142
February, 2021
99
May, 2019
94
December, 2017
88
November, 2018
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
41
November, 2019
35
December, 2018
29
July, 2019
25
January, 2019
24
February, 2018
23
April, 2019
23
October, 2017
19
April, 2020
17
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
64
bigWig
61
bam
tsv
15
bed bedMethyl
15
bigBed bedMethyl
4
bed bed3+
4
hdf5
3
bed narrowPeak
2
bigBed narrowPeak
Organism
29
Homo sapiens
Biosample type
17
tissue
12
primary cell
Organ
heart
8
epithelium
7
brain
7
vasculature
6
blood vessel
6
musculature of body
5
kidney
5
limb
3
liver
2
connective tissue
2
pancreas
1
artery
1
eye
1
pericardium
Project
29
AMP
Genome assembly (visualization)
20
hg19
4
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
heart
files.file_type!
tsv
BIOSAMPLE
ASSAY
29 results
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Clear Filters
RRBS
Hi-C
WGBS
ATAC-seq
FAIRE-seq
tissue
gastrocnemius medialis
4
aorta
2
kidney
1
1
brain
1
frontal cortex
1
+ See 7 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
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