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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
total RNA-seq
15
small RNA-seq
3
single cell RNA-seq
Assay category
58
Transcription
Target of assay
3
control
Date released
559
February, 2021
173
May, 2021
164
July, 2018
114
August, 2021
89
August, 2017
58
July, 2019
49
April, 2018
45
May, 2020
43
March, 2020
26
September, 2018
24
February, 2020
20
November, 2019
16
February, 2023
15
February, 2018
15
October, 2019
4
December, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
77
bigWig
75
bam
58
tsv
22
bed bedMethyl
22
bigBed bedMethyl
7
bed narrowPeak
3
bed bed3+
3
hdf5
2
bigBed narrowPeak
Organism
58
Homo sapiens
Biosample type
40
tissue
18
primary cell
Organ
16
connective tissue
12
adipose tissue
11
brain
11
heart
liver
6
kidney
5
blood vessel
5
epithelium
5
vasculature
4
musculature of body
4
pancreas
2
artery
1
pericardium
Project
58
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
58
AMP-T2D consortium
organ_slims!
liver
BIOSAMPLE
ASSAY
58 results
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total RNA-seq
small RNA-seq
single cell RNA-seq
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
diencephalon
1
1
+ See 12 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 10 more…
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