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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
RRBS
11
WGBS
6
ATAC-seq
4
Hi-C
2
FAIRE-seq
Assay category
Transcription
25
DNA methylation
8
DNA accessibility
4
3D chromatin structure
Date released
406
November, 2017
296
August, 2017
284
October, 2019
217
May, 2021
175
June, 2019
152
February, 2021
151
May, 2020
139
August, 2021
139
May, 2022
113
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
46
March, 2020
46
September, 2018
41
November, 2019
37
July, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
7
August, 2020
7
January, 2018
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
21
bed bedMethyl
21
bigBed bedMethyl
19
bigWig
16
bam
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
37
Homo sapiens
Biosample type
25
tissue
12
primary cell
Organ
14
heart
8
epithelium
7
brain
7
vasculature
6
blood vessel
musculature of body
5
kidney
5
limb
3
liver
2
connective tissue
2
pancreas
1
artery
1
eye
1
pericardium
Project
37
AMP
Genome assembly (visualization)
25
hg19
13
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
musculature of body
assay_slims!
Transcription
BIOSAMPLE
ASSAY
37 results
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Clear Filters
RRBS
WGBS
ATAC-seq
Hi-C
FAIRE-seq
tissue
heart left ventricle
1
4
2
aorta
2
heart right ventricle
2
kidney
1
1
brain
1
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 7 more…
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