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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
total RNA-seq
3
small RNA-seq
2
single cell RNA-seq
1
Hi-C
1
RRBS
Assay category
18
Transcription
1
3D chromatin structure
1
DNA methylation
Date released
455
February, 2021
125
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
14
February, 2023
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
19
bigWig
18
bam
18
tsv
2
fastq
1
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
Organism
20
Homo sapiens
Biosample type
10
primary cell
10
tissue
Organ
163
pancreas
46
epithelium
25
heart
20
connective tissue
18
brain
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
5
limb
3
artery
2
pericardium
1
eye
Project
20
AMP
Genome assembly (visualization)
20
hg19
18
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
20 results
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total RNA-seq
small RNA-seq
single cell RNA-seq
Hi-C
RRBS
primary cell
mesenchymal stem cell of adipose
1
1
pancreatic stellate cell
2
brain pericyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
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tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
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