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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
total RNA-seq
3
ATAC-seq
3
small RNA-seq
1
ChIP-seq
1
Hi-C
1
RRBS
Assay category
16
Transcription
3
DNA accessibility
1
3D chromatin structure
1
DNA binding
1
DNA methylation
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
455
February, 2021
125
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
14
February, 2023
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
20
bigWig
16
bam
16
tsv
3
bigBed narrowPeak
1
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
Organism
22
Homo sapiens
Biosample type
12
tissue
8
primary cell
2
in vitro differentiated cells
Organ
104
brain
74
limb
59
vasculature
58
blood vessel
48
epithelium
42
nerve
41
kidney
33
heart
29
artery
24
pancreas
22
connective tissue
22
eye
21
vein
17
liver
13
adipose tissue
10
musculature of body
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
Project
22
AMP
Genome assembly (visualization)
21
hg19
16
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
22 results
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total RNA-seq
ATAC-seq
small RNA-seq
ChIP-seq
Hi-C
RRBS
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
adipose tissue
1
islet of Langerhans
1
primary cell
mesenchymal stem cell of adipose
1
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
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in vitro differentiated cells
adipocyte
2
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