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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
5
Hi-C
5
small RNA-seq
2
RRBS
1
WGBS
Assay category
20
Transcription
5
3D chromatin structure
3
DNA methylation
Date released
455
February, 2021
151
August, 2017
61
June, 2019
28
July, 2019
23
October, 2018
14
February, 2023
7
March, 2020
7
May, 2019
6
November, 2020
5
August, 2021
4
February, 2020
4
October, 2019
2
April, 2018
2
January, 2018
2
July, 2018
2
May, 2021
2
May, 2022
1
August, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
22
bigWig
21
bam
20
tsv
3
bed bedMethyl
3
bigBed bedMethyl
1
bed bed3+
1
hdf5
Organism
28
Homo sapiens
Biosample type
17
tissue
11
primary cell
Organ
25
heart
18
brain
18
connective tissue
13
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
28
AMP
Genome assembly (visualization)
23
hg19
21
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
28 results
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total RNA-seq
Hi-C
small RNA-seq
RRBS
WGBS
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
gastrocnemius medialis
4
skeletal muscle tissue
1
1
muscle of leg
1
primary cell
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
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