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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
total RNA-seq
9
WGBS
4
ATAC-seq
4
Hi-C
3
RRBS
3
small RNA-seq
Assay category
15
Transcription
12
DNA methylation
4
3D chromatin structure
4
DNA accessibility
Date released
92
August, 2021
78
June, 2019
66
February, 2021
57
April, 2019
36
February, 2023
35
July, 2019
28
May, 2019
26
August, 2017
12
March, 2020
8
October, 2019
4
February, 2020
3
May, 2021
2
May, 2022
1
January, 2018
Available data
26
bam
26
bigWig
15
tsv
10
bed bedMethyl
10
bigBed bedMethyl
4
bed narrowPeak
Organism
35
Homo sapiens
Biosample type
27
tissue
8
primary cell
Organ
25
heart
18
brain
18
connective tissue
13
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
35
AMP
Genome assembly (visualization)
26
GRCh38
22
hg19
Lab
35
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
35 results
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total RNA-seq
WGBS
ATAC-seq
Hi-C
RRBS
small RNA-seq
tissue
heart left ventricle
2
4
2
1
gastrocnemius medialis
4
heart
2
1
1
right atrium auricular region
2
1
heart right ventricle
2
+ See 4 more…
primary cell
skeletal muscle satellite cell
1
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
+ See 2 more…
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