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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
3
single cell RNA-seq
1
Hi-C
Assay category
34
DNA binding
3
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
0
August, 2021
Available data
136
bed narrowPeak
126
tsv
86
bam
80
bigWig
64
xls
57
txt
38
fastq
30
bigBed narrowPeak
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
38
Homo sapiens
Biosample type
28
cell line
7
tissue
3
primary cell
Organ
27
blood
27
bodily fluid
7
spleen
1
epithelium
1
liver
1
pancreas
Project
38
AMP
Genome assembly (visualization)
33
GRCh38
33
hg19
Lab
38
AMP-T2D consortium
Audit category:
1
inconsistent control
1
inconsistent ontology term
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
single cell RNA-seq
Hi-C
cell line
GM12878
27
HepG2
1
tissue
spleen
7
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
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