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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
total RNA-seq
16
snATAC-seq
3
single cell RNA-seq
Assay category
26
Transcription
16
DNA accessibility
Date released
715
February, 2021
406
November, 2017
399
May, 2021
385
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
205
February, 2023
198
May, 2022
175
June, 2019
168
July, 2018
113
May, 2019
98
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
26
tsv
3
bam
3
bigWig
3
fastq
Organism
42
Homo sapiens
Biosample type
31
tissue
11
primary cell
Organ
12
brain
10
pancreas
8
blood
8
bodily fluid
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
musculature of body
1
epithelium
1
eye
1
liver
1
nerve
1
spinal cord
Project
26
AMP
16
T1D
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
26
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
42 results
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Clear Filters
total RNA-seq
snATAC-seq
single cell RNA-seq
tissue
islet of Langerhans
4
pancreas
4
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
+ See 20 more…
primary cell
peripheral blood mononuclear cell
8
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
See all biosamples
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