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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
183
DNase-seq
83
ChIP-seq
2
total RNA-seq
Assay category
183
DNA accessibility
83
DNA binding
2
Transcription
Target of assay
33
control
33
histone
33
histone modification
19
broad histone mark
17
transcription factor
14
narrow histone mark
13
RNA binding protein
Date released
587
February, 2021
411
August, 2017
406
November, 2017
333
May, 2020
316
August, 2021
309
May, 2021
291
October, 2019
200
May, 2022
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
47
March, 2020
47
September, 2023
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
268
bam
235
bigWig
233
bed narrowPeak
233
bigBed narrowPeak
183
bed bed3+
183
bed broadPeak
183
bigBed broadPeak
60
fastq
2
tsv
Organism
268
Homo sapiens
Biosample type
236
tissue
32
primary cell
Organ
77
kidney
57
pancreas
34
musculature of body
31
limb
30
brain
30
heart
29
connective tissue
24
adipose tissue
18
epithelium
18
ureter
7
eye
6
vasculature
5
blood vessel
2
artery
2
liver
Project
268
AMP
Genome assembly (visualization)
235
GRCh38
212
hg19
Lab
268
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
268 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
tissue
body of pancreas
2
33
heart
18
muscle of arm
17
endocrine pancreas
16
kidney
13
+ See 36 more…
primary cell
cardiac muscle cell
1
3
retinal pigment epithelial cell
1
3
cardiac fibroblast
2
1
skeletal muscle cell
1
2
glomerular visceral epithelial cell
2
+ See 14 more…
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