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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
31
DNA binding
3
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
713
February, 2021
406
November, 2017
397
May, 2021
378
August, 2017
341
May, 2020
314
August, 2021
306
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
104
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
221
bam
213
bigWig
210
bed narrowPeak
210
bigBed narrowPeak
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
4
fastq
3
tsv
1
bedpe bed3+
Organism
35
Homo sapiens
Biosample type
34
primary cell
1
in vitro differentiated cells
Organ
13
connective tissue
10
musculature of body
9
epithelium
5
heart
3
eye
3
kidney
3
pancreas
1
adipose tissue
Project
35
AMP
Genome assembly (visualization)
26
GRCh38
26
hg19
Lab
35
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
35 results
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ChIP-seq
single cell RNA-seq
pCHi-C
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
5
cardiac muscle cell
3
epithelial cell of proximal tubule
3
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in vitro differentiated cells
white fat cell
1
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