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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
DNase-seq
28
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
Assay category
111
DNA accessibility
28
DNA binding
4
Transcription
Target of assay
18
histone
18
histone modification
12
control
10
narrow histone mark
8
broad histone mark
5
nucleotide modification
3
RNA binding protein
3
transcription factor
Date released
707
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
284
October, 2019
205
February, 2023
200
May, 2022
189
August, 2021
168
July, 2018
137
June, 2019
115
May, 2019
97
July, 2019
94
December, 2017
88
November, 2018
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
April, 2019
49
April, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
143
bam
135
bigWig
132
bed narrowPeak
131
bigBed narrowPeak
110
bed bed3+
110
bed broadPeak
110
bigBed broadPeak
4
tsv
Organism
153
Homo sapiens
Biosample type
99
tissue
48
primary cell
6
cell line
Organ
kidney
43
musculature of body
35
heart
32
limb
30
brain
26
epithelium
24
connective tissue
18
ureter
14
pancreas
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
153
AMP
Genome assembly (visualization)
136
GRCh38
120
hg19
Lab
143
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
28
inconsistent ontology term
month_released!
April, 2019
organ_slims!
kidney
BIOSAMPLE
ASSAY
153 results
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Clear Filters
DNase-seq
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
muscle of leg
13
brain
12
islet of Langerhans
4
+ See 26 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
osteoblast
1
4
1
cardiac muscle cell
1
3
+ See 10 more…
cell line
EndoC_BH1
6
See all biosamples
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