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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
6
MeRIP-seq
4
DNase-seq
Assay category
22
DNA binding
4
DNA accessibility
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
narrow histone mark
7
control
3
nucleotide modification
2
RNA binding protein
2
transcription factor
Date released
128
February, 2021
90
May, 2021
26
June, 2019
23
October, 2019
22
November, 2019
17
March, 2020
11
February, 2023
May, 2020
6
July, 2018
6
November, 2020
4
December, 2017
3
August, 2021
3
May, 2019
2
December, 2019
2
July, 2019
1
February, 2020
1
June, 2018
Available data
26
bam
22
bed narrowPeak
22
bigBed narrowPeak
22
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
32
Homo sapiens
Biosample type
25
primary cell
6
cell line
1
tissue
Organ
12
connective tissue
10
epithelium
9
musculature of body
6
pancreas
5
heart
4
kidney
1
limb
1
vasculature
Project
32
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
26
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
32
inconsistent ontology term
month_released!
May, 2020
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
MeRIP-seq
DNase-seq
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
4
1
epithelial cell of proximal tubule
3
1
smooth muscle cell of the brain vasculature
1
cell line
EndoC_BH1
6
tissue
muscle of leg
1
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