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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
189
DNase-seq
13
ChIP-seq
Assay category
189
DNA accessibility
13
DNA binding
Target of assay
11
histone
11
histone modification
6
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
187
June, 2019
64
November, 2017
15
August, 2017
9
November, 2018
9
October, 2019
1
November, 2020
Available data
500
bam
482
bigWig
352
bed narrowPeak
287
fastq
252
bigBed narrowPeak
228
bed broadPeak
220
bed bed3+
202
bigBed broadPeak
89
tsv
85
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
Organism
202
Homo sapiens
Biosample type
163
tissue
38
primary cell
1
in vitro differentiated cells
Organ
78
kidney
33
musculature of body
32
limb
30
brain
30
heart
18
ureter
14
epithelium
7
connective tissue
7
vasculature
5
blood vessel
4
eye
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
202
AMP
Genome assembly (visualization)
200
GRCh38
179
hg19
Lab
202
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
202 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
skeletal muscle myoblast
1
13
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 16 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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