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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
6
DNase-seq
2
ATAC-seq
2
Capture-C
1
RNA microarray
Assay category
12
DNA binding
8
DNA accessibility
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
3
control
1
RNA binding protein
1
transcription factor
Date released
455
February, 2021
125
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
14
February, 2023
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
18
bam
17
bed narrowPeak
17
bigWig
15
bigBed narrowPeak
8
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
Organism
22
Homo sapiens
Biosample type
17
primary cell
4
in vitro differentiated cells
2
tissue
Organ
211
kidney
127
heart
43
musculature of body
37
liver
32
limb
30
brain
26
epithelium
23
connective tissue
18
ureter
13
vasculature
11
blood vessel
8
embryo
8
pancreas
7
eye
4
artery
2
adipose tissue
Project
23
AMP
Genome assembly (visualization)
18
hg19
15
GRCh38
Lab
19
AMP-T2D consortium
4
Struan F.A. Grant, CHOP
Audit category:
12
inconsistent ontology term
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Capture-C
RNA microarray
primary cell
cardiac fibroblast
5
3
mesenchymal stem cell
7
brain pericyte
1
hepatic stellate cell
1
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
tissue
omental fat pad
1
subcutaneous adipose tissue
1
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