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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
DNase-seq
65
ChIP-seq
1
Hi-C
Assay category
182
DNA accessibility
65
DNA binding
1
3D chromatin structure
Target of assay
32
transcription factor
19
histone
19
histone modification
12
control
11
narrow histone mark
8
broad histone mark
6
RNA binding protein
2
chromatin remodeller
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
247
bam
235
bed narrowPeak
235
bigBed narrowPeak
235
bigWig
182
bed bed3+
182
bed broadPeak
182
bigBed broadPeak
35
fastq
Organism
248
Homo sapiens
Biosample type
167
tissue
53
primary cell
28
cell line
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
27
blood
27
bodily fluid
20
epithelium
18
connective tissue
18
ureter
7
eye
7
spleen
7
vasculature
blood vessel
4
pancreas
3
liver
2
artery
1
adipose tissue
Project
248
AMP
Genome assembly (visualization)
235
GRCh38
213
hg19
Lab
248
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
1
inconsistent control
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
248 results
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Clear Filters
DNase-seq
ChIP-seq
Hi-C
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 33 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 15 more…
cell line
GM12878
27
HepG2
1
See all biosamples
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