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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
176
ChIP-seq
5
total RNA-seq
Assay category
187
DNA accessibility
176
DNA binding
5
Transcription
Target of assay
118
histone
118
histone modification
70
broad histone mark
48
narrow histone mark
35
control
23
transcription factor
15
RNA binding protein
6
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
368
bam
333
bigWig
328
bed narrowPeak
328
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
30
fastq
5
tsv
Organism
368
Homo sapiens
Biosample type
285
tissue
60
primary cell
23
cell line
Organ
86
kidney
58
brain
57
vasculature
56
heart
55
blood vessel
50
musculature of body
39
limb
25
epithelium
18
blood
18
bodily fluid
18
connective tissue
18
ureter
7
artery
7
eye
7
liver
7
spleen
6
pancreas
1
adipose tissue
Project
368
AMP
Genome assembly (visualization)
332
GRCh38
310
hg19
Lab
368
AMP-T2D consortium
Audit category:
29
inconsistent ontology term
BIOSAMPLE
ASSAY
368 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
tissue
muscle of leg
13
7
heart
18
ascending aorta
1
16
muscle of arm
17
thoracic aorta
16
+ See 41 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
kidney epithelial cell
1
5
cardiac muscle cell
1
3
+ See 17 more…
cell line
GM12878
18
HepG2
5
See all biosamples
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