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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
113
ChIP-seq
Assay category
187
DNA accessibility
113
DNA binding
Target of assay
89
histone
89
histone modification
50
broad histone mark
39
narrow histone mark
20
control
4
RNA binding protein
4
transcription factor
Date released
670
February, 2021
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
176
May, 2022
129
February, 2023
124
August, 2017
120
May, 2019
118
July, 2018
108
July, 2019
82
November, 2017
80
April, 2019
64
March, 2020
61
November, 2019
47
September, 2023
25
February, 2020
19
April, 2020
18
September, 2020
16
January, 2021
16
November, 2020
16
October, 2018
15
May, 2023
10
December, 2019
6
October, 2017
5
April, 2018
5
March, 2023
4
March, 2019
4
October, 2022
3
January, 2018
1
August, 2022
Available data
610
bam
544
bigWig
523
bed narrowPeak
522
bigBed narrowPeak
fastq
257
bed broadPeak
251
bigBed broadPeak
187
bed bed3+
78
tagAlign
3
tar
Organism
300
Homo sapiens
Biosample type
245
tissue
55
primary cell
Organ
112
brain
81
kidney
43
musculature of body
35
heart
32
limb
20
epithelium
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
300
AMP
Genome assembly (visualization)
267
GRCh38
193
hg19
Lab
300
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
300 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
layer of hippocampus
22
heart
18
muscle of arm
17
caudate nucleus
1
15
substantia nigra
15
+ See 38 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 17 more…
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