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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
358
ChIP-seq
187
DNase-seq
Assay category
358
DNA binding
187
DNA accessibility
Target of assay
248
transcription factor
107
histone
107
histone modification
control
66
recombinant protein
58
broad histone mark
49
narrow histone mark
41
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
531
bam
528
bigWig
523
bed narrowPeak
522
bigBed narrowPeak
265
fastq
257
bed broadPeak
251
bigBed broadPeak
187
bed bed3+
67
tagAlign
3
tar
Organism
545
Homo sapiens
Biosample type
259
cell line
233
tissue
53
primary cell
Organ
261
liver
106
brain
80
kidney
41
musculature of body
33
heart
32
limb
22
epithelium
18
ureter
15
connective tissue
11
vasculature
7
blood vessel
6
eye
4
pancreas
2
artery
1
adipose tissue
Project
545
AMP
Genome assembly (visualization)
490
GRCh38
452
hg19
Lab
545
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
control
BIOSAMPLE
ASSAY
545 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
259
tissue
layer of hippocampus
19
heart
18
muscle of arm
17
caudate nucleus
13
1
kidney
13
+ See 38 more…
primary cell
skeletal muscle satellite cell
7
cardiac fibroblast
3
3
mesenchymal stem cell
6
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
+ See 17 more…
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