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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
248
ChIP-seq
Assay category
248
DNA binding
Target of assay
248
transcription factor
107
histone
107
histone modification
79
control
66
recombinant protein
58
broad histone mark
49
narrow histone mark
41
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
4
June, 2019
1
November, 2019
Available data
247
bam
244
bigWig
244
fastq
240
bed narrowPeak
240
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
248
Homo sapiens
Biosample type
241
cell line
7
primary cell
Organ
241
liver
4
epithelium
3
brain
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
heart
1
kidney
Project
248
AMP
Genome assembly (visualization)
242
hg19
208
GRCh38
Lab
248
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
248 results
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ChIP-seq
cell line
HepG2
241
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
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